| Attachment | Size |
|---|---|
 Download Table as Excel file | 11.92 KB |
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Trait: |
Sweet cherry fruit size – weight, dimensions, mesocarp cell number |
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Locus: |
Quantitative trait locus about a third of the way down the linkage group of sweet cherry chromosome 2 (Zhang et al. 2009), equivalent to the middle of the TxE Prunus reference map and peach chromosome 2. |
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Marker: |
Two QTL-flanking SSRs, CPSCT038 and BPPCT034, which are 10-20 cM apart (Olmstead et al. 2008). |
Table of Functional Alleles:
| Cultivar | 1st Haplotype (*1) | 2nd Haplotype (*1) | Source (*2) |
|---|---|---|---|
| Ambrunes | 190-255 | 190-223 | a,b,c |
| Benton | 190-223 | 192-223 | a,b,c |
| Bing | 190-255 | 204-235 | a,b,c |
| Black Republican | 204-235 | (190-225) | c |
| Brooks | 190-255 | 190-223 | a,b,c |
| Cashmere | 190-223 | 190-223 | c |
| Chelan | 190-223 | 192-223 | a,b |
| Chinook | 190-255 | 204-235 | a,b,c |
| Cowiche | 190-223 | 190-223 | b,c |
| Early Burlat | 190-223 | 190-237 | b,c |
| Emperor Francis | 190-255 | 204-235 | a,b,c |
| Gil-Peck | 190-255 | 192-223 | b,c |
| Glacier | 190-223 | 190-237 | a,b,c |
| Kiona | 190-223 | 190-237 | b,c |
| Lambert | 190-255 | 192-223 | a,b,c |
| Lapins | 204-235 | 204-255 | a,b,c |
| MIM 17 | 190-255 | (202-250) | c |
| MIM 23 | 192-223 | (202-250) | c |
| Napoleon | 190-255 | 204-235 | a,b,c |
| Newstar | 190-255 | 190-223 | b |
| NY54 | 190-255 | 192-225 | a,b,c |
| PMR-1 | 190-255 | 192-223 | a,b,c |
| Rainier | 190-255 | 204-235 | a,b,c |
| Regina | 190-255 | 204-223 | a,b,c |
| Sam | 190-255 | 190-255 | a,b,c |
| Sato Nishiki | 190-255 | 204-235 | c |
| Schmidt | 190-255 | (192-250) | a,b,c |
| Schneiders | 190-255 | (190-257) | a,b,c |
| Selah | 190-255 | 190-223 | a,b,c |
| Selection AA | 190-255 | 190-255 | c |
| Selection BB | 190-255 | 192-223 | a,b,c |
| Selection CC | 190-255 | 190-255 | a,b,c |
| Selection DD | 190-255 | 190-255 | a,b,c |
| Selection EE | 190-255 | 204-235 | a,b,c |
| Selection GG | 190-255 | 190-235 | a,b,c |
| Selection JJ | 190-255 | 190-255 | c |
| Stella | 204-235 | 190-223 | a,b,c |
| Summit | 190-255 | 204-255 | a,b,c |
| Sweetheart | 190-255 | 204-235 | b,c |
| Tieton | 190-223 | 190-237 | a,b,c |
| Ulster | 190-255 | (192-250) | a,b,c |
| Van | 190-255 | 204-235 | a,b,c |
| Vic | 190-255 | 190-255 | a,b,c |
| Windsor | 190-255 | 190-225 | a,b,c |
Explanation of Terms:
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Formatting indicate whether the haplotype is associated with large, small, or (presumed small) fruit size. Recombined haplotypes are not assigned a functional association unless they are a recombination between two large-fruit haplotypes or two small-fruit haplotypes. The logic behind haplotype assignment to a presumed small fruit size effect is that the cultivars known to carry such haplotypes have small fruit and these haplotypes are very rare in the cultivated germplasm pool (with presumed selection against them during domestication).
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Information sources are: a = unpublished data from USDA CSREES NRI project (grant no. 2005-35300-15454) led by A. Iezzoni, Michigan State University b = unpublished data from WTFRC project led by C. Peace, Washington State University c = RosBREED results (genotyped cultivars of the sweet cherry Crop Reference Set) |
References Cited
Olmstead JW, Sebolt AM, Cabrera A, Sooriyapathirana SS, Hammar S, Iriarte G, Wang D, Chen CY, van der Knaap E, Iezzoni AF (2008). Construction of an intra-specific sweet cherry (Prunus avium L.) genetic linkage map and synteny analysis with the Prunus reference map. Tree Genetics & Genomes 4:897-910.
Zhang G, Sebolt AM, Sooriyapathirana SS, Wang D, Bink MCAM, Olmstead JW, Iezzoni AF (2009). Fruit size QTL analysis of an F1 population derived from a cross between a domesticated sweet cherry cultivar and a wild forest sweet cherry. Tree Genetics & Genomes 6:25-36.